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基于EST和GSS序列的木豆miRNA生物信息学分析
Identification of microRNA in Cajanus cajan based on EST and GSS Sequences

作  者: ; ; ;

机构地区: 生物化学与分子生物学教研室

出  处: 《安徽农学通报》 2014年第10期17-19,67,共4页

摘  要: 应用miRtour在线分析工具对木豆EST和GSS序列进行miRNA生物信息学预测,应用psRNATarget进行靶基因预测。结果发现,43条不同的木豆miRNA成熟序列,隶属于33个不同的miRNA家族。靶基因预测发现有36条编码序列受miRNA调控,其中17条序列编码酶,2条编码转录因子,7条编码参与细胞信号转导的蛋白,5条编码参与蛋白质降解通路的蛋白。 Cajanus cajan microRNA has been predicted based on EST and GSS Sequences by miRtour, whereas miRNA-targeted mRNAs has been predicted by psRNATarget. 43 unique mature miRNA sequenc-es were found belonging to 33 different miRNA familes in Cajanus cajan. 36 coding RNAs were regulated by miRNA in which 17 targets were enzymes,2 targets were transcription factors,7 targets were protein in-volved in signaling transduction,5 targets were protein participated in protein degradation pathway.

关 键 词: 木豆

领  域: [生物学]

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