帮助 本站公告
您现在所在的位置:网站首页 > 知识中心 > 文献详情
文献详细Journal detailed

甜菜花叶病毒新疆分离物基因组3′末端序列分析
Sequence analysis of 3' terminal region of genome of Beet mosaic virus Xinjiang isolate

作  者: ; ; ; ; ; ;

机构地区: 中国农业大学生物学院农业生物技术国家重点实验室

出  处: 《植物病理学报》 2007年第2期204-206,共3页

摘  要: The 3’ terminal genomic 1 611 nucleotides of Beet mosaic virus Xinjiang isolate(BtMV-XJ)from China was determined(GenBank accession number DQ345522).The sequence started within a single open reading frame which was expected to encode part C-terminus of NIb protein of 201 amino acids,complete capsid protein(CP)of 276 amino acids and followed by a 3’ untranslated region(UTR)of 168 nucleotides.The comparison of sequence diversity among BtMV-XJ and other three previously reported isolates revealed that it shared 98.3%,98.1%,91.4% nucleotide identity,and 99.79%,99.58%,97.69% deduced aa sequence identity with the corresponding 3’ terminal regions of BtMV-SL,BtMV-UK and BtMV-US,respectively,and that most nucleotide mutations were silent with no effect on aa sequence.In addition,a virus-specific and ra-pid RT-PCR detection method of BtMV was also developed based on the nucleotide sequence obtained. The 3' terminal genomic 1 611 nucleotides of Beet mosaic virus Xinjiang isolate (BtMV-XJ) from China was determined (GenBank accession number DQ345522). The sequence started within a single open reading frame which was expected to encode part C-terminus of NIb protein of 201 amino acids, complete capsid protein (CP) of 276 amino acids and followed by a 3' untranslated region (UTR) of 168 nucleotides. The comparison of sequence diversity among BtMV-XJ and other three previously reported isolates revealed that it shared 98.3%, 98.1%, 91.4% nucleotide identity, and 99.79%, 99.58%, 97.69% deduced aa sequence identity with the corresponding 3' terminal regions of BtMV-SL, BtMV-UK and BtMV-US, respectively, and that most nucleotide mutations were silent with no effect on aa sequence. In addition, a virus-specific and rapid RT-PCR detection method of BtMV was also developed based on the nucleotide sequence obtained.

关 键 词: 花叶病毒 序列分析 分离物 甜菜 新疆 马铃薯 病毒属 基因组 分子结构特征

领  域: [农业科学] [农业科学]

相关作者

作者 顾采琴

相关机构对象

机构 广州大学

相关领域作者

作者 李振义
作者 吴晨
作者 张琳
作者 丁培强
作者 吴肖林